MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Micrococcus yunnanensis
19428wG4_IOV6
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 248
bases: 2,477,181 bps
CDS: 2,232
rRNA: 3
Repeat region:
tmRNA: 1
tRNA: 49
misc RNA:
Total features: 2,285
Total number of protein coding genes annotated/found:
2,232
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5018|JADGKS010000100.1
SEQF5018_00001
Genome Viewer
NA
AA
795/265
910-116
hypothetical protein
SEQF5018|JADGKS010000100.1
SEQF5018_00002
Genome Viewer
NA
AA
246/82
1344-1099
hypothetical protein
SEQF5018|JADGKS010000100.1
SEQF5018_00003
Genome Viewer
NA
AA
2262/754
3607-1346
Peptide transporter CstA
SEQF5018|JADGKS010000100.1
SEQF5018_00004
Genome Viewer
NA
AA
1092/364
4724-3633
Branched-chain-amino-acid aminotransferase
SEQF5018|JADGKS010000100.1
SEQF5018_00005
Genome Viewer
NA
AA
1125/375
5994-4870
3-isopropylmalate dehydrogenase
SEQF5018|JADGKS010000100.1
SEQF5018_00006
Genome Viewer
NA
AA
1626/542
7643-6018
Methionine--tRNA ligase
SEQF5018|JADGKS010000100.1
SEQF5018_00007
Genome Viewer
NA
AA
777/259
8412-7636
hypothetical protein
SEQF5018|JADGKS010000111.1
SEQF5018_00123
Genome Viewer
NA
AA
855/285
264-1118
hypothetical protein
SEQF5018|JADGKS010000111.1
SEQF5018_00124
Genome Viewer
NA
AA
1146/382
2187-1042
hypothetical protein
SEQF5018|JADGKS010000111.1
SEQF5018_00125
Genome Viewer
NA
AA
1422/474
2943-4364
Dimethyl-sulfide monooxygenase
SEQF5018|JADGKS010000111.1
SEQF5018_00126
Genome Viewer
NA
AA
186/62
4677-4862
hypothetical protein
SEQF5018|JADGKS010000111.1
SEQF5018_00127
Genome Viewer
NA
AA
1152/384
5000-6151
hypothetical protein
SEQF5018|JADGKS010000111.1
SEQF5018_00128
Genome Viewer
NA
AA
678/226
6218-6895
Response regulator protein VraR
SEQF5018|JADGKS010000111.1
SEQF5018_00129
Genome Viewer
NA
AA
792/264
6990-7781
hypothetical protein
SEQF5018|JADGKS010000131.1
SEQF5018_00327
Genome Viewer
NA
AA
1257/419
1287-31
N-acetyldiaminopimelate deacetylase
SEQF5018|JADGKS010000131.1
SEQF5018_00328
Genome Viewer
NA
AA
1152/384
2500-1349
Mannose-1-phosphate guanylyltransferase RfbM
SEQF5018|JADGKS010000131.1
SEQF5018_00329
Genome Viewer
NA
AA
405/135
2748-3152
Succinate dehydrogenase 2 membrane subunit SdhC
SEQF5018|JADGKS010000131.1
SEQF5018_00330
Genome Viewer
NA
AA
480/160
3156-3635
hypothetical protein
SEQF5018|JADGKS010000131.1
SEQF5018_00331
Genome Viewer
NA
AA
1788/596
3713-5500
Succinate dehydrogenase flavoprotein subunit
SEQF5018|JADGKS010000131.1
SEQF5018_00332
Genome Viewer
NA
AA
792/264
5500-6291
Succinate dehydrogenase iron-sulfur subunit
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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